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byr3 translational activator, zf-CCHC type zinc finger protein [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542829, updated on 18-Sep-2024

Summary

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Official Symbol
byr3
Official Full Name
translational activator, zf-CCHC type zinc finger protein
Primary source
PomBase:SPAC13D6.02c
Locus tag
SPOM_SPAC13D6.02C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See byr3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2247229..2248563, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene microtubule plus-end binding protein, EB1 family Mal3 Neighboring gene ncRNA Neighboring gene F-box protein Pof14 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Gly

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A gene encoding a protein with seven zinc finger domains acts on the sexual differentiation pathways of Schizosaccharomyces pombe. Xu HP, et al. Mol Biol Cell, 1992 Jul. PMID 1515675, Free PMC Article
  2. Concerted action of RAS and G proteins in the sexual response pathways of Schizosaccharomyces pombe. Xu HP, et al. Mol Cell Biol, 1994 Jan. PMID 8264618, Free PMC Article
  3. A new genetic method for isolating functionally interacting genes: high plo1(+)-dependent mutants and their suppressors define genes in mitotic and septation pathways in fission yeast. Cullen CF, et al. Genetics, 2000 Aug. PMID 10924454, Free PMC Article
  4. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
  5. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables single-stranded RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables translation activator activity ISO
Inferred from Sequence Orthology
more info
  
enables translation regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in positive regulation of cytoplasmic translation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
is_active_in nucleolus HDA PubMed 

General protein information

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Preferred Names
translational activator, zf-CCHC type zinc finger protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2247229..2248563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019112.3 → NP_593680.1  translational activator, zf-CCHC type zinc finger protein [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593680.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P36627
    Conserved Domains (1) summary
    PTZ00368
    Location:19 → 174
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
Nucleotide Protein
Heading Accession and Version

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