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hsp3104 ThiJ domain protein, glyoxylase III [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542927, updated on 18-Sep-2024

Summary

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Official Symbol
hsp3104
Official Full Name
ThiJ domain protein, glyoxylase III
Primary source
PomBase:SPAC11D3.13
Locus tag
SPOM_SPAC11D3.13
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See hsp3104 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (130170..131268)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene cysteine desulfurase nifs family protein Neighboring gene truncated GAL4-like Zn2Cys6 binuclear cluster DNA-binding protein Neighboring gene ncRNA Neighboring gene oxoprolinase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ATP-hydrolizing 5-oxoprolinase Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene. Lang BF, et al. J Mol Biol, 1985 Aug 5. PMID 4046021

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables glyoxalase III activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cellular detoxification IC
Inferred by Curator
more info
  
involved_in methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
ThiJ domain protein, glyoxylase III

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    130170..131268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018208.3 → NP_592808.1  ThiJ domain protein, glyoxylase III [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_592808.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10092
    Conserved Domains (2) summary
    COG0693
    Location:51 → 206
    ThiJ; Putative intracellular protease/amidase [General function prediction only]
    cl00020
    Location:43 → 206
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain
Nucleotide Protein
Heading Accession and Version

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