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psd3 phosphatidylserine decarboxylase Psd3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543178, updated on 18-Sep-2024

Summary

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Official Symbol
psd3
Official Full Name
phosphatidylserine decarboxylase Psd3
Primary source
PomBase:SPAC31G5.15
Locus tag
SPOM_SPAC31G5.15
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See psd3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
8
Sequence:
Chromosome: I; NC_003424.3 (3014288..3017900)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene 19S proteasome regulatory subunit, ubiquitin-specific protease subunit Rpn11 Neighboring gene ncRNA Neighboring gene glycine decarboxylase T subunit gcv1 Neighboring gene ncRNA Neighboring gene dolichyl-phosphate beta-D-mannosyltransferase catalytic subunit Dpm1 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phosphatidylethanolamine is required for normal cell morphology and cytokinesis in the fission yeast Schizosaccharomyces pombe. Luo J, et al. Eukaryot Cell, 2009 May. PMID 19286980, Free PMC Article
  2. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article
  3. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
  4. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article
  5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Psd1, psd2, and psd3, encoding phosphatidylserine decarboxylases catalyze the phosphatidylserine to phosphatidylethanolamine.
    Title: Phosphatidylethanolamine is required for normal cell morphology and cytokinesis in the fission yeast Schizosaccharomyces pombe.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables phosphatidylserine decarboxylase activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables phosphatidylserine decarboxylase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables phospholipid binding ISM
Inferred from Sequence Model
more info
  
Process Evidence Code Pubs
involved_in phosphatidylcholine biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in phosphatidylethanolamine biosynthetic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in phosphatidylethanolamine biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein autoprocessing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in Golgi membrane ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in Golgi stack IEA
Inferred from Electronic Annotation
more info
  
is_active_in cell division site HDA PubMed 
is_active_in cytosol HDA PubMed 
is_active_in endosome IEA
Inferred from Electronic Annotation
more info
  
is_active_in fungal-type vacuole membrane ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
phosphatidylserine decarboxylase Psd3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3014288..3017900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019442.3 → NP_594016.2  phosphatidylserine decarboxylase Psd3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594016.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14111
    Conserved Domains (2) summary
    cd04039
    Location:267 → 374
    C2_PSD; C2 domain present in Phosphatidylserine decarboxylase (PSD)
    cl03656
    Location:656 → 952
    PS_Dcarbxylase; Phosphatidylserine decarboxylase
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials