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tif52 translation initiation factor Tif52 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543241, updated on 14-Nov-2024

Summary

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Official Symbol
tif52
Official Full Name
translation initiation factor Tif52
Primary source
PomBase:SPAC56F8.03
Locus tag
SPOM_SPAC56F8.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See tif52 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1129520..1133089)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene AMP binding enzyme Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene para-hydroxybenzoate--polyprenyltransferase Ppt1 Neighboring gene BAR domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article
  2. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables GTP binding IC
Inferred by Curator
more info
  
enables membrane scission GTPase motor activity IEA
Inferred from Electronic Annotation
more info
  
enables translation initiation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translational initiation ISO
Inferred from Sequence Orthology
more info
  
involved_in translational initiation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 
part_of eukaryotic 48S preinitiation complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
translation initiation factor Tif52

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1129520..1133089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018614.3 → NP_593218.1  translation initiation factor Tif52 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593218.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q10251
    Conserved Domains (5) summary
    cd01887
    Location:485 → 697
    IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
    PRK04004
    Location:479 → 1065
    PRK04004; translation initiation factor IF-2; Validated
    pfam11987
    Location:821 → 920
    IF-2; Translation-initiation factor 2
    cd03703
    Location:709 → 818
    aeIF5B_II; Domain II of archaeal and eukaryotic Initiation Factor 5
    cl02787
    Location:953 → 1044
    Translation_Factor_II_like; Domain II of Elongation factor Tu (EF-Tu)-like proteins
Nucleotide Protein
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