U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

gaa1 GPI-anchor transamidase complex subunit Gaa1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543268, updated on 14-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
gaa1
Official Full Name
GPI-anchor transamidase complex subunit Gaa1
Primary source
PomBase:SPAC1002.11
Locus tag
SPOM_SPAC1002.11
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See gaa1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1816499..1818558)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene dihydrolipoamide dehydrogenase Dld1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene snRNP binding protein Sgt1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative succinate-semialdehyde dehydrogenase Neighboring gene ncRNA Neighboring gene beta-glucosidase Psu1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Biosynthesis of GPI-anchored proteins: special emphasis on GPI lipid remodeling. Kinoshita T, et al. J Lipid Res, 2016 Jan. PMID 26563290, Free PMC Article
  2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
contributes_to GPI-anchor transamidase activity TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in attachment of GPI anchor to protein IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in endoplasmic reticulum HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GPI-anchor transamidase complex subunit Gaa1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1816499..1818558
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018932.3 → NP_593498.1  GPI-anchor transamidase complex subunit Gaa1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593498.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9US48
    Conserved Domains (1) summary
    pfam04114
    Location:123 → 552
    Gaa1; Gaa1-like, GPI transamidase component
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials