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rpc82 DNA-directed RNA polymerase III complex subunit Rpc82 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543417, updated on 18-Sep-2024

Summary

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Official Symbol
rpc82
Official Full Name
DNA-directed RNA polymerase III complex subunit Rpc82
Primary source
PomBase:SPAPB1E7.03
Locus tag
SPOM_SPAPB1E7.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See rpc82 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (3286544..3288578)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DNA polymerase alpha accessory factor Mcl1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene chitinase Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA processing factors Swd2.2 and Sen1 antagonize RNA Pol III-dependent transcription and the localization of condensin at Pol III genes. Legros P, et al. PLoS Genet, 2014 Nov. PMID 25392932, Free PMC Article
  2. Pfh1 Is an Accessory Replicative Helicase that Interacts with the Replisome to Facilitate Fork Progression and Preserve Genome Integrity. McDonald KR, et al. PLoS Genet, 2016 Sep. PMID 27611590, Free PMC Article
  3. SR protein kinases promote splicing of nonconsensus introns. Lipp JJ, et al. Nat Struct Mol Biol, 2015 Aug. PMID 26167880
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
contributes_to DNA-directed 5'-3' RNA polymerase activity ISO
Inferred from Sequence Orthology
more info
  
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transcription by RNA polymerase III ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
part_of RNA polymerase III complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase III complex subunit Rpc82

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3286544..3288578
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019553.3 → NP_594129.1  DNA-directed RNA polymerase III complex subunit Rpc82 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594129.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9C106
    Conserved Domains (2) summary
    pfam05645
    Location:144 → 423
    RNA_pol_Rpc82; RNA polymerase III subunit RPC82
    pfam08221
    Location:7 → 65
    HTH_9; RNA polymerase III subunit RPC82 helix-turn-helix domain
Nucleotide Protein
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Gene LinkOut

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