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F55G1.6 RING-CH-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 259576, updated on 4-Jan-2025

Summary

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Official Symbol
F55G1.6
Official Full Name
RING-CH-type domain-containing protein
Primary source
WormBase:WBGene00018902
Locus tag
CELE_F55G1.6
See related
AllianceGenome:WB:WBGene00018902
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in virL and virR. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F55G1.6 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
5
Sequence:
Chromosome: IV; NC_003282.8 (7473517..7474959)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene F-box C protein Neighboring gene ncRNA Neighboring gene Serine/threonine-protein kinase plk-3 Neighboring gene SLC (SoLute Carrier) homolog Neighboring gene Putative pyrroline-5-carboxylate reductase 4 Neighboring gene Kinetochore-associated protein rod-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RING-CH-type domain-containing protein
NP_001343657.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    7473517..7474959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001356926.3 → NP_001343657.1  RING-CH-type domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20846
    Conserved Domains (2) summary
    cl17238
    Location:39 → 87
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    cl19579
    Location:167 → 269
    Peptidase_U4; Sporulation factor SpoIIGA
Nucleotide Protein
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