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C33D9.6 Protein CASP [ Caenorhabditis elegans ]

Gene ID: 259585, updated on 4-Jan-2025

Summary

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Official Symbol
C33D9.6
Official Full Name
Protein CASP
Primary source
WormBase:WBGene00007900
Locus tag
CELE_C33D9.6
See related
AllianceGenome:WB:WBGene00007900
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in hypodermis; muscle cell; and ventral cord neurons. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See C33D9.6 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
9
Sequence:
Chromosome: IV; NC_003282.8 (8773989..8778145, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ELKS/RAB6-interacting/CAST family member 2 Neighboring gene pseudo Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General protein information

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Preferred Names
Protein CASP
NP_001263755.1
  • Confirmed by transcript evidence
NP_001366747.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    8773989..8778145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001380383.2 → NP_001366747.1  Protein CASP [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18377
    Conserved Domains (1) summary
    TIGR02168
    Location:124 → 329
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. NM_001276826.3 → NP_001263755.1  Protein CASP [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263755.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    I7LHV5
Nucleotide Protein
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