U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CMQ_985 ccch zinc finger DNA-binding protein [ Grosmannia clavigera kw1407 ]

Gene ID: 25982124, updated on 30-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
CMQ_985
Gene description
ccch zinc finger DNA-binding protein
Locus tag
CMQ_985
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Grosmannia clavigera kw1407 (strain: kw1407, culture-collection: UAMH:11150)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Leptographium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CMQ_985 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_014040801.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene gamma-glutamyltranspeptidase Neighboring gene transcription initiation factor beta subunit Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_014040801.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen. DiGuistini S, et al. Proc Natl Acad Sci U S A, 2011 Feb 8. PMID 21262841, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ccch zinc finger DNA-binding protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_014040801.1 Reference assembly

    Range
    901106..902784 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014318064.1 → XP_014173539.1  ccch zinc finger DNA-binding protein [Grosmannia clavigera kw1407]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F0XDU7
    Conserved Domains (1) summary
    COG5084
    Location:174 → 374
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases