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pre-rRNA:CR45847 ribosomal RNA primary transcript:CR45847 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 26067175, updated on 9-Dec-2024

Summary

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Official Symbol
pre-rRNA:CR45847provided by FlyBase
Official Full Name
ribosomal RNA primary transcript:CR45847provided by FlyBase
Primary source
FLYBASE:FBgn0267507
Locus tag
Dmel_CR45847
See related
AllianceGenome:FB:FBgn0267507
Gene type
miscRNA
RNA name
pre-ribosomal RNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR45847; Dmel\CR45847; FBgn0267507; pre-rRNA
Summary
Predicted to be a structural constituent of ribosome. Predicted to be located in ribosome. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See pre-rRNA:CR45847 in Genome Data Viewer
Location:
chromosome: X; Y
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X; Y NW_007931121.1 (66807..74924)

NW_007931121.1Genomic Context describing neighboring genes Neighboring gene ribosomal RNA primary transcript:CR45846 Neighboring gene 5.8S ribosomal RNA:CR45839 Neighboring gene 2S ribosomal RNA:CR45840 Neighboring gene 18S ribosomal RNA:CR45841 Neighboring gene 5.8S ribosomal RNA:CR45842 Neighboring gene 2S ribosomal RNA:CR45843 Neighboring gene 28S ribosomal RNA:CR45844 Neighboring gene mir-10404-2 stem loop

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007931121.1 Chromosome X; Y Reference Release 6 plus ISO1 MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Live-imaging of single stem cells within their niche reveals that a U3snoRNP component segregates asymmetrically and is required for self-renewal in Drosophila. Fichelson P, et al. Nat Cell Biol, 2009 Jun. PMID 19430468
  2. Behavioral screening of sleep-promoting effects of human intestinal and food-associated bacteria on Drosophila melanogaster. Ko T, et al. Genes Cells, 2023 Jun. PMID 36914986, Free PMC Article
  3. Comprehensive map of ribosomal 2'-O-methylation and C/D box snoRNAs in Drosophila melanogaster. Sklias A, et al. Nucleic Acids Res, 2024 Apr 12. PMID 38416577, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • pre-rRNA:CR45847-RA; Dmel\pre-rRNA:CR45847-RA; CR45847-RA; Dmel\CR45847-RA

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_007931121.1 Reference assembly

    Range
    66807..74924
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_133558.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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