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PAN0_004d2464 uncharacterized protein [ Moesziomyces antarcticus ]

Gene ID: 26303305, updated on 29-Dec-2023

Summary

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Gene symbol
PAN0_004d2464
Gene description
uncharacterized protein
Locus tag
PAN0_004d2464
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Moesziomyces antarcticus (strain: JCM 10317, type-material: type material of Sporobolomyces antarcticus)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces
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Genomic context

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See PAN0_004d2464 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_014639006.1Genomic Context describing neighboring genes Neighboring gene beta-glucan synthesis-associated protein Neighboring gene elongation factor g 1 mitochondrial precursor Neighboring gene beta-lactamase-like protein Neighboring gene lysine 2,3-aminomutase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014639006.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft Genome Sequence of the Yeast Pseudozyma antarctica Type Strain JCM10317, a Producer of the Glycolipid Biosurfactants, Mannosylerythritol Lipids. Saika A, et al. Genome Announc, 2014 Sep 25. PMID 25291760, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_014657893.1
  • top hit is XP_761951.1 originated in Ustilago maydis 521

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_014639006.1 Reference assembly

    Range
    945454..950306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014802407.1 → XP_014657893.1  uncharacterized protein PAN0_004d2464 [Moesziomyces antarcticus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A081CC57, M9MD28
    Conserved Domains (2) summary
    sd00017
    Location:15 → 37
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:29 → 54
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases