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PAN0_012d4520 transporter [ Moesziomyces antarcticus ]

Gene ID: 26305383, updated on 29-Dec-2023

Summary

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Gene symbol
PAN0_012d4520
Gene description
transporter
Locus tag
PAN0_012d4520
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Moesziomyces antarcticus (strain: JCM 10317, type-material: type material of Sporobolomyces antarcticus)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces
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Genomic context

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See PAN0_012d4520 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_014638998.1Genomic Context describing neighboring genes Neighboring gene CDC5 protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014638998.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft Genome Sequence of the Yeast Pseudozyma antarctica Type Strain JCM10317, a Producer of the Glycolipid Biosurfactants, Mannosylerythritol Lipids. Saika A, et al. Genome Announc, 2014 Sep 25. PMID 25291760, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion with Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ER to Golgi transport vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transporter
XP_014655543.1
  • top hit is XP_760560.1 originated in Ustilago maydis 521

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_014638998.1 Reference assembly

    Range
    354977..359113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014800057.1 → XP_014655543.1  transporter [Moesziomyces antarcticus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A081CI02, M9LQ35
    Conserved Domains (2) summary
    PTZ00121
    Location:871 → 1366
    PTZ00121; MAEBL; Provisional
    pfam04869
    Location:429 → 742
    Uso1_p115_head; Uso1 / p115 like vesicle tethering protein, head region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases