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ANOM_006243 RNA polymerase II subunit A C-terminal domain phosphatase [ Aspergillus nomius NRRL 13137 ]

Gene ID: 26808047, updated on 31-Oct-2024

Summary

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Gene symbol
ANOM_006243
Gene description
RNA polymerase II subunit A C-terminal domain phosphatase
Locus tag
ANOM_006243
Gene type
protein coding
RNA name
RNA polymerase II subunit A C-terminal domain phosphatase
RefSeq status
PROVISIONAL
Organism
Aspergillus nomius NRRL 13137 (strain: NRRL 13137, nat-host: wheat, type-material: culture from type material of Aspergillus nomius)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
Orthologs
Aspergillus fumigatus all
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Genomic context

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See ANOM_006243 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_015378184.1Genomic Context describing neighboring genes Neighboring gene vacuolar protease A Neighboring gene putative O-methyltransferase Neighboring gene hypothetical protein Neighboring gene arginase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015378184.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the aflatoxigenic filamentous fungus Aspergillus nomius. Moore GG, et al. BMC Genomics, 2015 Jul 28. PMID 26216546, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II CTD heptapeptide repeat phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA polymerase II subunit A C-terminal domain phosphatase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015378184.1 Reference assembly

    Range
    33540..36381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015551500.1 → XP_015407008.1  RNA polymerase II subunit A C-terminal domain phosphatase, partial [Aspergillus nomius NRRL 13137]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0L1J351
    Conserved Domains (3) summary
    TIGR02250
    Location:183 → 343
    FCP1_euk; FCP1-like phosphatase, phosphatase domain
    COG5190
    Location:166 → 631
    FCP1; TFIIF-interacting CTD phosphatase, includes NLI-interacting factor [Transcription]
    cd00027
    Location:543 → 616
    BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...
Nucleotide Protein
Heading Accession and Version

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