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Snord34 small nucleolar RNA, C/D box 34 [ Mus musculus (house mouse) ]

Gene ID: 27210, updated on 2-Nov-2024

Summary

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Official Symbol
Snord34provided by MGI
Official Full Name
small nucleolar RNA, C/D box 34provided by MGI
Primary source
MGI:MGI:1351325
See related
Ensembl:ENSMUSG00000065878 AllianceGenome:MGI:1351325
Gene type
snoRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
U34; Rnu34
Summary
Acts upstream of or within glucose metabolic process; insulin secretion; and reactive oxygen species metabolic process. Orthologous to human SNORD34 (small nucleolar RNA, C/D box 34). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Snord34 in Genome Data Viewer
Location:
7 B3; 7 29.14 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (44776027..44776092, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (45126603..45126668, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene 45552 Neighboring gene ribosomal protein S11 Neighboring gene small nucleolar RNA, C/D box 35B Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:52379668-52379777 Neighboring gene ribosomal protein L13A Neighboring gene small nucleolar RNA, C/D box 35A Neighboring gene small nucleolar RNA, C/D box 33 Neighboring gene microRNA 5121 Neighboring gene small nucleolar RNA, C/D box 32A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure of the gene of tum- transplantation antigen P198: a point mutation generates a new antigenic peptide. Sibille C, et al. J Exp Med, 1990 Jul 1. PMID 1694221, Free PMC Article
  2. Gene organization and sequence of the region containing the ribosomal protein genes RPL13A and RPS11 in the human genome and conserved features in the mouse genome. Higa S, et al. Gene, 1999 Nov 29. PMID 10580157
  3. Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs. Nicoloso M, et al. J Mol Biol, 1996 Jul 12. PMID 8764399
  4. Rpl13a small nucleolar RNAs regulate systemic glucose metabolism. Lee J, et al. J Clin Invest, 2016 Dec 1. PMID 27820699, Free PMC Article
  5. Interaction of Sox2 with RNA binding proteins in mouse embryonic stem cells. Samudyata, et al. Exp Cell Res, 2019 Aug 1. PMID 31077711, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Other Names

  • RNA, U34 small nucleolar
  • U34 snoRNA

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within glucose metabolic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within insulin secretion IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within reactive oxygen species metabolic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002455.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    X51528
    Related
    ENSMUST00000083944.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    44776027..44776092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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