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Ribosomal protein L18ae family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 2745829, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein L18ae family
Primary source
TAIR:AT1G54217
Locus tag
AT1G54217
See related
Araport:AT1G54217
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (20243883..20245555, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ubiquitin-like superfamily protein Neighboring gene proline-rich family protein Neighboring gene Dihydrolipoamide acetyltransferase, long form protein Neighboring gene Winged helix-turn-helix transcription repressor DNA-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001160951.1
NM_001160952.2
NM_001333636.1
NM_001333637.1
NM_202293.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ribosomal protein L18ae family
NP_001154423.1
  • Ribosomal protein L18ae family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 110 Blast hits to 110 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_001154424.1
  • Ribosomal protein L18ae family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 109 Blast hits to 109 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_974022.1
  • Ribosomal protein L18ae family; BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20243883..20245555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333634.1 → NP_001321218.1  Ribosomal protein L18ae family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W652, A0A384KWJ3, A0A654EJT3, Q56YV7

  2. NM_001333635.1 → NP_001321221.1  Ribosomal protein L18ae family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W652, A0A384KWJ3, A0A654EJT3, Q56YV7

  3. NM_001333638.1 → NP_001321219.1  Ribosomal protein L18ae family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EJT3, A0A7G2E3U1, F4HV88

  4. NM_202293.2 → NP_974022.1  Ribosomal protein L18ae family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974022.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W652, A0A384KWJ3, A0A654EJT3, Q56YV7

  5. NM_001333636.1 → NP_001321217.1  Ribosomal protein L18ae family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W652, A0A384KWJ3, A0A654EJT3, Q56YV7

  6. NM_001333637.1 → NP_001321220.1  Ribosomal protein L18ae family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W652, A0A384KWJ3, A0A654EJT3, Q56YV7

  7. NM_001160952.2 → NP_001154424.1  Ribosomal protein L18ae family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154424.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W652, A0A384KWJ3, A0A654EJT3, Q56YV7

  8. NM_001160951.1 → NP_001154423.1  Ribosomal protein L18ae family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154423.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EJT3, A0A7G2E3U1, F4HV88
Nucleotide Protein
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