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CG42676 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 2768999, updated on 4-Jan-2025

Summary

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Official Symbol
CG42676provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0261562
Locus tag
Dmel_CG42676
See related
AllianceGenome:FB:FBgn0261562
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG12022; CG13923; CG32317; Dmel\CG42676
Old locus tag
Dmel_CG12022; Dmel_CG13923
Summary
Is expressed in organism. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG42676 in Genome Data Viewer
Location:
62B4-62B4; 3-1.0 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1803107..1806920)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1803107..1806920)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Cell division cycle 37 Neighboring gene uncharacterized protein Neighboring gene patj Neighboring gene JTBR Neighboring gene antisense RNA:CR45686 Neighboring gene long non-coding RNA:CR45687 Neighboring gene GV1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Domain-specific early and late function of Dpatj in Drosophila photoreceptor cells. Nam SC, et al. Dev Dyn, 2006 Jun. PMID 16518799
  2. The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. Jehrke L, et al. Sci Rep, 2018 Apr 18. PMID 29670218, Free PMC Article
  3. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
  4. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
  5. circRNA biogenesis competes with pre-mRNA splicing. Ashwal-Fluss R, et al. Mol Cell, 2014 Oct 2. PMID 25242144

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG42676-PC
CG42676-PD
CG42676-PE
CG42676-PF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    1803107..1806920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299976.1 → NP_001286905.1  uncharacterized protein Dmel_CG42676, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286905.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B6IDI1, Q9W081

  2. NM_206238.4 → NP_995960.2  uncharacterized protein Dmel_CG42676, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_995960.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B6IDI1, Q9W081

  3. NM_001274362.1 → NP_001261291.1  uncharacterized protein Dmel_CG42676, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261291.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PGW2

  4. NM_001202091.2 → NP_001189020.1  uncharacterized protein Dmel_CG42676, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001189020.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9MSJ7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9MSJ7 M9MSJ7
M9PGW2 M9PGW2
Q961L1 Q961L1
Q9W081 Q9W081

Gene LinkOut

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