SYP synaptophysin [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: SYPprovided by VGNC
Official Full Name: synaptophysinprovided by VGNC
Primary source: VGNC:VGNC:35534
See related: BGD:BT21103; Ensembl:ENSBTAG00000016096
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: X

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_12	current	ARS-UCD2.0 (GCF_002263795.3)	X	NC_037357.1 (87230210..87242010, complement)

Chromosome X - NC_037357.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:: NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Dominette sequence data
BioProject: PRJNA294306
Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

The structure of SYP has been determined.
Title: Structure of synaptophysin: a hexameric MARVEL-domain channel protein.

Submit: New GeneRIF Correction

General gene information

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Markers

DXS1007E (e-PCR)
- UniSTS:99643

SYP (e-PCR), detects polymorphism
- UniSTS:279169

SYP (e-PCR), detects polymorphism
- UniSTS:279723

G15886 (e-PCR)
- UniSTS:74686

Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in regulation of neuronal synaptic plasticity	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in presynaptic active zone	IEA Inferred from Electronic Annotation more info	PubMed
located_in synaptic vesicle	IEA Inferred from Electronic Annotation more info	PubMed
located_in synaptic vesicle membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: synaptophysin

Names: major synaptic vesicle protein p38

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.