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CST3 cystatin C [ Bos taurus (domestic cattle) ]

Gene ID: 281102, updated on 1-Jan-2025

Summary

Gene symbol
CST3
Gene description
cystatin C
See related
BGD:BT20005; Ensembl:ENSBTAG00000000598
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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Genomic context

See CST3 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (42185282..42189207, complement)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene cystatin-9 Neighboring gene cystatin-9-like Neighboring gene synapse differentiation inducing 1 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene transfer RNA cysteine (anticodon ACA)

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Expression

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC133662

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
cystatin-C
Names
colostrum thiol proteinase inhibitor
cystatin C (amyloid angiopathy and cerebral hemorrhage)
cystatin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174029.1NP_776454.1  cystatin-C precursor

    See identical proteins and their annotated locations for NP_776454.1

    Status: PROVISIONAL

    Source sequence(s)
    Y10811
    UniProtKB/Swiss-Prot
    P01035, Q54A26
    Related
    ENSBTAP00000000790.4, ENSBTAT00000000790.6
    Conserved Domains (1) summary
    smart00043
    Location:37147
    CY; Cystatin-like domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    42185282..42189207 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)