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C4BPB complement component 4 binding protein beta [ Bos taurus (domestic cattle) ]

Gene ID: 281652, updated on 27-Dec-2024

Summary

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Official Symbol
C4BPBprovided by VGNC
Official Full Name
complement component 4 binding protein betaprovided by VGNC
Primary source
VGNC:VGNC:26640
See related
BGD:BT29735; Ensembl:ENSBTAG00000017714
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human all
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Genomic context

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See C4BPB in Genome Data Viewer
Location:
chromosome: 16
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (4913353..4933348)

Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 Neighboring gene YOD1 deubiquitinase Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene complement component 4 binding protein alpha Neighboring gene zona pellucida sperm-binding protein 3 receptor Neighboring gene C4b-binding protein alpha-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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Related articles in PubMed

  1. Bovine C4b binding protein. Molecular cloning of the alpha- and beta-chains provides structural background for lack of complex formation with protein S. Hillarp A, et al. J Immunol, 1994 Nov 1. PMID 7930621
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
C4b-binding protein beta chain

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174253.3 → NP_776678.2  C4b-binding protein beta chain precursor

    See identical proteins and their annotated locations for NP_776678.2

    Status: PROVISIONAL

    Source sequence(s)
    BC112543
    UniProtKB/Swiss-Prot
    Q28066, Q2KIR2
    Related
    ENSBTAP00000023558.3, ENSBTAT00000023558.5
    Conserved Domains (1) summary
    cd00033
    Location:81 → 134
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    4913353..4933348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024976026.2 → XP_024831794.1  C4b-binding protein beta chain isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MCY9, A0AAA9TVY0
    Conserved Domains (1) summary
    cl27761
    Location:9 → 154
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

  2. XM_024976029.2 → XP_024831797.1  C4b-binding protein beta chain isoform X4

    UniProtKB/Swiss-Prot
    Q28066, Q2KIR2
    UniProtKB/TrEMBL
    G3X7B8
    Conserved Domains (1) summary
    cd00033
    Location:81 → 134
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

  3. XM_059875237.1 → XP_059731220.1  C4b-binding protein beta chain isoform X2

  4. XM_024976027.2 → XP_024831795.1  C4b-binding protein beta chain isoform X3

    UniProtKB/TrEMBL
    A0A3Q1MCY9
    Conserved Domains (1) summary
    cd00033
    Location:77 → 130
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

  5. XM_015475001.3 → XP_015330487.1  C4b-binding protein beta chain isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MCY9, A0AAA9TVY0
    Related
    ENSBTAP00000102498.1, ENSBTAT00000131935.1
    Conserved Domains (1) summary
    cl27761
    Location:9 → 154
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

  6. XM_024976028.2 → XP_024831796.1  C4b-binding protein beta chain isoform X3

    UniProtKB/TrEMBL
    A0A3Q1MCY9
    Related
    ENSBTAP00000066677.2, ENSBTAT00000073282.2
    Conserved Domains (1) summary
    cd00033
    Location:77 → 130
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q28066.1 GenPept UniProtKB/Swiss-Prot:Q28066

Gene LinkOut

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