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gatR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 2847672, updated on 3-Dec-2024

Summary

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Official Symbol
gatR
Primary source
ECOCYC:EG12162
Locus tag
b4498
See related
ASAP:ABE-0285099
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
b2087; b2090; ECK2083
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Genomic context

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Sequence:
NC_000913.3 (2169693..2171727, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YegR Neighboring gene lipid kinase YegS Neighboring gene IS3 element protein InsE Neighboring gene IS3 element protein InsF Neighboring gene galactitol-1-phosphate 5-dehydrogenase Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large inversion in Escherichia coli K-12 1485IN between inversely oriented IS3 elements near lac and cdd. Komoda Y, et al. Genetics, 1991 Nov. PMID 1661252, Free PMC Article
  2. Repressor for the sn-glycerol 3-phosphate regulon of Escherichia coli K-12: primary structure and identification of the DNA-binding domain. Zeng G, et al. J Bacteriol, 1996 Dec. PMID 8955387, Free PMC Article
  3. Sequence of the gat operon for galactitol utilization from a wild-type strain EC3132 of Escherichia coli. Nobelmann B, et al. Biochim Biophys Acta, 1995 May 17. PMID 7772602
  4. Effects of a static magnetic field on cell growth and gene expression in Escherichia coli. Potenza L, et al. Mutat Res, 2004 Jul 11. PMID 15238230
  5. The genes and enzymes for the catabolism of galactitol, D-tagatose, and related carbohydrates in Klebsiella oxytoca M5a1 and other enteric bacteria display convergent evolution. Shakeri-Garakani A, et al. Mol Genet Genomics, 2004 Jul. PMID 15257457

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: c2170167-2169693 gene fragment 2 of gatR
  • Loc: c2171727-2171429 gene fragment 1 of gatR

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

Gene LinkOut

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