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B-cell lymphoma 6 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 28717277, updated on 18-Sep-2024

Summary

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Official Full Name
B-cell lymphoma 6 protein
Primary source
TAIR:AT1G29290
Locus tag
AT1G29290
See related
Araport:AT1G29290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28N24.30; F28N24_30
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (10244453..10245874)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene transcription factor bHLH35-like protein Neighboring gene WRKY DNA-binding protein 65 Neighboring gene intracellular protein transporter, putative (DUF641) Neighboring gene SecY protein transport family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CEP genes regulate root and shoot development in response to environmental cues and are specific to seed plants. Delay C, et al. J Exp Bot, 2013 Dec. PMID 24179096
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001332843.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables hormone activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
  
involved_in nitrate import ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in regulation of root development ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in response to carbon dioxide IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in response to osmotic stress IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
B-cell lymphoma 6 protein
NP_001319106.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    10244453..10245874
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001332843.1 → NP_001319106.1  B-cell lymphoma 6 protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q52K95
    UniProtKB/TrEMBL
    A0A178W8A1, A0A5S9W9T8
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q52K95.1

Gene LinkOut

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Molecular Biology Databases