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MIR824 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 28720179, updated on 11-Sep-2024

Summary

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Official Symbol
MIR824
Primary source
TAIR:AT4G24415
Locus tag
AT4G24415
See related
Araport:AT4G24415
Gene type
ncRNA
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
microRNA824A; MIR824A; p_MI0005409
Summary
Encodes a microRNA that targets AGL16. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UAGACCAUUUGUGAGAAGGGA
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Genomic context

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See MIR824 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (12625094..12625782)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene CBL-interacting protein kinase 8 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. miR824-Regulated AGAMOUS-LIKE16 Contributes to Flowering Time Repression in Arabidopsis. Hu JY, et al. Plant Cell, 2014 May. PMID 24876250, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • mature miRNA accession:MIMAT0004277
  • mature miRNA accession:MIMAT0032024

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
acts_upstream_of_or_within long-day photoperiodism, flowering IMP
Inferred from Mutant Phenotype
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    12625094..12625782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_142348.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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Molecular Biology Databases