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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001009258.1 → NP_001009258.1 E3 ubiquitin-protein ligase CHFR
See identical proteins and their annotated locations for NP_001009258.1
Status: PROVISIONAL
- Source sequence(s)
-
BC087162
- UniProtKB/TrEMBL
- A6J2C9, F1LN16, Q5PQJ8
- Conserved Domains (3) summary
-
- COG1716
Location:27 → 140
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:16 → 105
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd00162
Location:302 → 345
- RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086030.1 Reference GRCr8
- Range
-
52164214..52197860 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006249535.5 → XP_006249597.1 E3 ubiquitin-protein ligase CHFR isoform X1
- UniProtKB/TrEMBL
- A0A8J8XDG1, A6J2C9
- Related
- ENSRNOP00000053478.4, ENSRNOT00000056639.5
- Conserved Domains (3) summary
-
- COG1716
Location:27 → 140
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:16 → 105
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd00162
Location:302 → 345
- RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
-
XM_006249536.5 → XP_006249598.1 E3 ubiquitin-protein ligase CHFR isoform X2
- UniProtKB/TrEMBL
- A0A8I5XWV2, A6J2C9
- Related
- ENSRNOP00000078152.1, ENSRNOT00000099226.2
- Conserved Domains (3) summary
-
- COG1716
Location:27 → 140
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:16 → 105
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd00162
Location:302 → 345
- RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...