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GVI51_I05577 uncharacterized protein [ Nakaseomyces glabratus ]

Gene ID: 2889347, updated on 6-Dec-2024

Summary

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Gene symbol
GVI51_I05577
Gene description
uncharacterized protein
Locus tag
GVI51_I05577
See related
FungiDB:GVI51_I05577; VEuPathDB:GVI51_I05577
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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Genomic context

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See GVI51_I05577 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_088959.1 (552086..553015)

Chromosome I - NC_088959.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene phospholipid:diacylglycerol acyltransferase Neighboring gene ESCRT-0 subunit protein VPS27 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088959.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • CAGL0I05808g
    Ortholog(s) have Atg8 ligase activity and role in C-terminal protein lipidation, autophagosome assembly, autophagy of mitochondrion, late nucleophagy, piecemeal microautophagy of nucleus, protein localization by the Cvt pathway

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Atg8-family ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_447502.1
  • CAGL0I05808g
    Ortholog(s) have Atg8 ligase activity and role in C-terminal protein lipidation, autophagosome assembly, autophagy of mitochondrion, late nucleophagy, piecemeal microautophagy of nucleus, protein localization by the Cvt pathway

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_088959.1 Reference assembly

    Range
    552086..553015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_447502.1 → XP_447502.1  uncharacterized protein GVI51_I05577 [Nakaseomyces glabratus]

    See identical proteins and their annotated locations for XP_447502.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q6FQJ2
    UniProtKB/TrEMBL
    A0A0W0EJL0
    Conserved Domains (1) summary
    pfam03987
    Location:32 → 304
    Autophagy_act_C; Autophagocytosis associated protein, active-site domain
Nucleotide Protein
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Gene LinkOut

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