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GVI51_J00495 proteasome regulatory particle base subunit RPN1 [ Nakaseomyces glabratus ]

Gene ID: 2889882, updated on 6-Dec-2024

Summary

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Gene symbol
GVI51_J00495
Gene description
proteasome regulatory particle base subunit RPN1
Locus tag
GVI51_J00495
See related
FungiDB:GVI51_J00495; VEuPathDB:GVI51_J00495
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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Genomic context

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See GVI51_J00495 in Genome Data Viewer
Location:
chromosome: J
Exon count:
1
Sequence:
Chromosome: J; NC_088960.1 (69906..72857)

Chromosome J - NC_088960.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene dipeptidyl aminopeptidase Neighboring gene H(+)-transporting V0 sector ATPase subunit c'' Neighboring gene homoserine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088960.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • CAGL0J00605g
    Ortholog(s) have protein binding, bridging activity and role in proteasome-mediated ubiquitin-dependent protein catabolic process

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle, base subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in proteasome storage granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome regulatory particle base subunit RPN1
XP_447738.1
  • CAGL0J00605g
    Ortholog(s) have protein binding, bridging activity and role in proteasome-mediated ubiquitin-dependent protein catabolic process

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_088960.1 Reference assembly

    Range
    69906..72857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_447738.1 → XP_447738.1  proteasome regulatory particle base subunit RPN1 [Nakaseomyces glabratus]

    See identical proteins and their annotated locations for XP_447738.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q6FPV6
    UniProtKB/TrEMBL
    A0A0W0CMM9
    Conserved Domains (1) summary
    COG5110
    Location:3 → 983
    RPN1; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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