U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DEHA2E15862g DEHA2E15862p [ Debaryomyces hansenii CBS767 ]

Gene ID: 2902623, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
DEHA2E15862g
Gene description
DEHA2E15862p
Locus tag
DEHA2E15862g
See related
FungiDB:DEHA2E15862g; VEuPathDB:DEHA2E15862g
Gene type
protein coding
RNA name
DEHA2E15862p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DEHA2E15862g in Genome Data Viewer
Location:
chromosome: E
Exon count:
1
Sequence:
Chromosome: E; NC_006047.2 (1284731..1286260)

Chromosome E - NC_006047.2Genomic Context describing neighboring genes Neighboring gene DEHA2E15840p Neighboring gene ncRNA Neighboring gene DEHA2E15884p Neighboring gene DEHA2E15906p

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_006047.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DEHA2E15862p
XP_459991.2
  • weakly similar to uniprot|P41940 Saccharomyces cerevisiae YDL055C PSA1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006047.2 Reference assembly

    Range
    1284731..1286260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_459991.2 → XP_459991.2  DEHA2E15862p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_459991.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q6BP79
    Conserved Domains (3) summary
    COG1208
    Location:57 → 455
    GCD1; NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis proteins [Translation, ribosomal structure and biogenesis, Cell wall/membrane/envelope biogenesis]
    cl00160
    Location:386 → 457
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
    cl11394
    Location:58 → 355
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials