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Prelid1 PRELI domain containing 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 290995, updated on 27-Nov-2024

Summary

Official Symbol
Prelid1provided by RGD
Official Full Name
PRELI domain containing 1provided by RGD
Primary source
RGD:1308082
See related
EnsemblRapid:ENSRNOG00000016410 AllianceGenome:RGD:1308082
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Preli; RGD1308082
Summary
Predicted to enable phosphatidic acid transfer activity. Predicted to be involved in several processes, including negative regulation of mitochondrial membrane potential; positive regulation of phospholipid transport; and regulation of apoptotic process. Predicted to be located in mitochondrion and nucleoplasm. Predicted to be part of protein-containing complex. Predicted to be active in mitochondrial intermembrane space. Orthologous to human PRELID1 (PRELI domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Kidney (RPKM 304.7), Liver (RPKM 252.6) and 9 other tissues See more
Orthologs
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Genomic context

See Prelid1 in Genome Data Viewer
Location:
17p14
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (9310471..9313511, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (9305349..9308389, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (9834245..9837285, complement)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134482676 Neighboring gene Max dimerization protein 3 Neighboring gene RAB24, member RAS oncogene family Neighboring gene nuclear receptor binding SET domain protein 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Clone Names

  • MGC109157

Gene Ontology Provided by RGD

Function Evidence Code Pubs
contributes_to phosphatidic acid transfer activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in mitochondrial intermembrane space ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
PRELI domain-containing protein 1, mitochondrial
Names
protein of relevant evolutionary and lymphoid interest

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001009636.1NP_001009636.1  PRELI domain-containing protein 1, mitochondrial

    See identical proteins and their annotated locations for NP_001009636.1

    Status: PROVISIONAL

    Source sequence(s)
    BC088284
    UniProtKB/TrEMBL
    Q5M829
    Related
    ENSRNOP00000100636.1, ENSRNOT00000022134.9
    Conserved Domains (1) summary
    pfam04707
    Location:16172
    PRELI; PRELI-like family

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    9310471..9313511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)