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DEHA2B16258g DEHA2B16258p [ Debaryomyces hansenii CBS767 ]

Gene ID: 2913634, updated on 17-May-2024

Summary

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Gene symbol
DEHA2B16258g
Gene description
DEHA2B16258p
Locus tag
DEHA2B16258g
See related
FungiDB:DEHA2B16258g; VEuPathDB:DEHA2B16258g
Gene type
protein coding
RNA name
DEHA2B16258p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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Genomic context

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See DEHA2B16258g in Genome Data Viewer
Location:
chromosome: B
Exon count:
1
Sequence:
Chromosome: B; NC_006044.2 (1286299..1287915, complement)

Chromosome B - NC_006044.2Genomic Context describing neighboring genes Neighboring gene DEHA2B16214p Neighboring gene DEHA2B16236p Neighboring gene DEHA2B16280p Neighboring gene DEHA2B16302p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006044.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-arabinofuranosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in polysaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEHA2B16258p
XP_457658.2
  • similar to uniprot|Q5KC75 Cryptococcus neoformans var CNH00030

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006044.2 Reference assembly

    Range
    1286299..1287915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_457658.1 → XP_457658.2  DEHA2B16258p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_457658.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q6BVW1
    Conserved Domains (1) summary
    cl01412
    Location:19 → 492
    Alpha-L-AF_C; Alpha-L-arabinofuranosidase C-terminus
Nucleotide Protein
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Gene LinkOut

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