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Cst2l cystatin 2 like [ Rattus norvegicus (Norway rat) ]

Gene ID: 296230, updated on 17-Aug-2024

Summary

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Official Symbol
Cst2lprovided by RGD
Official Full Name
cystatin 2 likeprovided by RGD
Primary source
RGD:1563136
See related
AllianceGenome:RGD:1563136
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1563136
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Cst2l in Genome Data Viewer
Location:
3q41
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (157579251..157583130, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (137116122..137122502, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (143608979..143615096, complement)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene cystatin related protein 2 Neighboring gene eukaryotic translation initiation factor 1 like 1 Neighboring gene cystatin-S-like Neighboring gene cystatin-S-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
cystatin-related protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    157579251..157583130 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063285209.1 → XP_063141279.1  cystatin-related protein 2-like

Nucleotide Protein Strain
Heading Accession and Version

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