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Mrpl41 mitochondrial ribosomal protein L41 [ Rattus norvegicus (Norway rat) ]

Gene ID: 296551, updated on 4-Jan-2025

Summary

Official Symbol
Mrpl41provided by RGD
Official Full Name
mitochondrial ribosomal protein L41provided by RGD
Primary source
RGD:1310241
See related
EnsemblRapid:ENSRNOG00000080840 AllianceGenome:RGD:1310241
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in mitochondrion. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL41 (mitochondrial ribosomal protein L41). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Heart (RPKM 426.9), Kidney (RPKM 360.3) and 9 other tissues See more
Orthologs
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Genomic context

See Mrpl41 in Genome Data Viewer
Location:
3p13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (28178837..28179755, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (7780658..7781576, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (2181044..2181962, complement)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene zinc finger, MYND-type containing 19 Neighboring gene diphthamide biosynthesis 7 Neighboring gene patatin-like phospholipase domain containing 7 Neighboring gene glutathione S-transferase pi 1, pseudogene 3 Neighboring gene NMDA receptor synaptonuclear signaling and neuronal migration factor

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC109209

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome ISO
Inferred from Sequence Orthology
more info
 
enables structural constituent of ribosome ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 
involved_in translation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in translation ISO
Inferred from Sequence Orthology
more info
 
involved_in translation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of mitochondrial large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
part_of mitochondrial large ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
part_of ribonucleoprotein complex ISO
Inferred from Sequence Orthology
more info
 
part_of ribonucleoprotein complex ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
large ribosomal subunit protein mL41
Names
39S ribosomal protein L41, mitochondrial
L41mt
MRP-L41

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013426.1NP_001013444.1  large ribosomal subunit protein mL41 precursor

    See identical proteins and their annotated locations for NP_001013444.1

    Status: PROVISIONAL

    Source sequence(s)
    BC091293
    UniProtKB/Swiss-Prot
    Q5BJX1
    UniProtKB/TrEMBL
    A6JSZ9
    Related
    ENSRNOP00000111033.1, ENSRNOT00000151529.1
    Conserved Domains (1) summary
    pfam09809
    Location:13124
    MRP-L27; Mitochondrial ribosomal protein L27

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    28178837..28179755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)