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dnaA chromosomal replication initiator protein DnaA [ Pseudoalteromonas shioyasakiensis ]

Gene ID: 29848171, updated on 17-May-2023

Summary

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Gene symbol
dnaA
Gene description
chromosomal replication initiator protein DnaA
Locus tag
PASHI_RS03455
Gene type
protein coding
Organism
Pseudoalteromonas shioyasakiensis (strain: JCM 18891, type-material: type strain of Pseudoalteromonas shioyasakiensis)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas
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Genomic context

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NZ_LRUE01000006.1Genomic Context describing neighboring genes Neighboring gene ribonuclease P protein component Neighboring gene 50S ribosomal protein L34 Neighboring gene DNA polymerase III subunit beta Neighboring gene DNA replication/repair protein RecF

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LRUE01000006.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural and thermodynamic signatures of DNA recognition by Mycobacterium tuberculosis DnaA. Tsodikov OV, et al. J Mol Biol, 2011 Jul 15. PMID 21620858
  2. Structure and function of DnaA and the DnaA-box in eubacteria: evolutionary relationships of bacterial replication origins. Yoshikawa H, et al. Mol Microbiol, 1991 Nov. PMID 1779750
  3. DnaA: controlling the initiation of bacterial DNA replication and more. Kaguni JM. Annu Rev Microbiol, 2006. PMID 16753031

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
chromosomal replication initiator protein DnaA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LRUE01000006.1 Reference assembly

    Range
    25953..27350
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_062564601.1 MULTISPECIES: chromosomal replication initiator protein DnaA [Pseudoalteromonas]

    Conserved Domains (4) summary
    cd06571
    Location:374 → 463
    Bac_DnaA_C; C-terminal domain of bacterial DnaA proteins. The DNA-binding C-terminal domain of DnaA contains a helix-turn-helix motif that specifically interacts with the DnaA box, a 9-mer motif that occurs repetitively in the replication origin oriC. Multiple ...
    TIGR00362
    Location:6 → 463
    DnaA; chromosomal replication initiator protein DnaA
    pfam00308
    Location:130 → 348
    Bac_DnaA; Bacterial dnaA protein
    pfam11638
    Location:4 → 65
    DnaA_N; DnaA N-terminal domain