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CG17778 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 30996, updated on 18-Sep-2024

Summary

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Official Symbol
CG17778provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0023534
Locus tag
Dmel_CG17778
See related
AllianceGenome:FB:FBgn0023534
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RH02374; Dmel\CG17778; EG:171D11.5
Orthologs
all
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Genomic context

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See CG17778 in Genome Data Viewer
Location:
1B5-1B5; 1-0 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (494614..496369)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (388647..390402)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45797 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44891 Neighboring gene antisense RNA:CR44892 Neighboring gene silver

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mef2 induction of the immediate early gene Hr38/Nr4a is terminated by Sirt1 to promote ethanol tolerance. Adhikari P, et al. Genes Brain Behav, 2019 Mar. PMID 29726098, Free PMC Article
  2. Genome-wide identification of neuronal activity-regulated genes in Drosophila. Chen X, et al. Elife, 2016 Dec 9. PMID 27936378, Free PMC Article
  3. An analysis of genetic changes during the divergence of Drosophila species. Sousa-Neves R, et al. PLoS One, 2010 May 5. PMID 20463966, Free PMC Article
  4. Drosophila Voltage-Gated Sodium Channels Are Only Expressed in Active Neurons and Are Localized to Distal Axonal Initial Segment-like Domains. Ravenscroft TA, et al. J Neurosci, 2020 Oct 14. PMID 32928889, Free PMC Article
  5. From first base: the sequence of the tip of the X chromosome of Drosophila melanogaster, a comparison of two sequencing strategies. Benos PV, et al. Genome Res, 2001 May. PMID 11337470, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG17778-PA
CG17778-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    494614..496369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001297812.1 → NP_001284741.1  uncharacterized protein Dmel_CG17778, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001284741.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O46059, Q8MYW2
    Conserved Domains (1) summary
    cl17165
    Location:16 → 108
    SKA2; Spindle and kinetochore-associated protein 2

  2. NM_130490.2 → NP_569846.2  uncharacterized protein Dmel_CG17778, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_569846.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O46059, Q8MYW2
    Related
    FBpp0070079, FBtr0070080
    Conserved Domains (1) summary
    cl17165
    Location:16 → 108
    SKA2; Spindle and kinetochore-associated protein 2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O46059 O46059
Q8MYW2 Q8MYW2

Gene LinkOut

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