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HYPBUDRAFT_9934 hypothetical protein [ Hyphopichia burtonii NRRL Y-1933 ]

Gene ID: 30998580, updated on 21-Dec-2023

Summary

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Gene symbol
HYPBUDRAFT_9934
Gene description
hypothetical protein
Locus tag
HYPBUDRAFT_9934
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Hyphopichia burtonii NRRL Y-1933 (strain: NRRL Y-1933)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Hyphopichia
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Genomic context

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See HYPBUDRAFT_9934 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_017963729.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene PLP-dependent transferase Neighboring gene mitochondrial malate dehydrogenase Neighboring gene tRNA-Thr

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017963729.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of biotechnologically important yeasts. Riley R, et al. Proc Natl Acad Sci U S A, 2016 Aug 30. PMID 27535936, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_020077519.1
  • expressed protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_017963729.1 Reference assembly

    Range
    306841..309259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020224031.1 → XP_020077519.1  hypothetical protein HYPBUDRAFT_9934 [Hyphopichia burtonii NRRL Y-1933]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1E4RMG1
    Conserved Domains (3) summary
    smart00355
    Location:724 → 746
    ZnF_C2H2; zinc finger
    sd00017
    Location:726 → 746
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:738 → 765
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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