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Vps26 Vacuolar protein sorting 26 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31144, updated on 4-Jan-2025

Summary

Official Symbol
Vps26provided by FlyBase
Official Full Name
Vacuolar protein sorting 26provided by FlyBase
Primary source
FLYBASE:FBgn0014411
Locus tag
Dmel_CG14804
See related
AllianceGenome:FB:FBgn0014411
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
131F2S; anon-sts13; CG14804; Dmel\CG14804; DmVps26; dvps26; dVps26; Dvps26; EG:63B12.8; ESTS:131F2S; vps26; VPS26
Summary
Enables cargo receptor activity. Involved in endosome to plasma membrane protein transport and regulation of Wnt signaling pathway. Part of retromer complex. Is expressed in adult head; adult heart; and photoreceptor neurons. Used to study brain cancer. Human ortholog(s) of this gene implicated in diabetic retinopathy and type 2 diabetes mellitus. Orthologous to several human genes including VPS26B (VPS26 retromer complex component B). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Vps26 in Genome Data Viewer
Location:
2B13-2B13; 1-0.2 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (1873853..1876474)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (1767886..1770507)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Mediator complex subunit 18 Neighboring gene Peroxin 5 Neighboring gene uncharacterized protein Neighboring gene Phosphoglycerate mutase 5 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cytochrome c oxidase assembly factor 8 Neighboring gene trithorax-related

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables cargo receptor activity IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in endosome to plasma membrane protein transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 
involved_in intracellular protein transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
NOT involved_in regulation of BMP signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of Wnt signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in retrograde transport, endosome to Golgi IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in retrograde transport, endosome to Golgi ISS
Inferred from Sequence or Structural Similarity
more info
 
NOT involved_in smoothened signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in endosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endosome ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of retromer complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of retromer complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of retromer, cargo-selective complex ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
vacuolar protein sorting 26
Names
CG14804-PA
Vps26-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    1873853..1876474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130596.3NP_569952.2  vacuolar protein sorting 26 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_569952.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O46088, Q4QQB4, Q95SD6, Q9W552
    Related
    FBpp0070298
    Conserved Domains (1) summary
    pfam03643
    Location:6280
    Vps26; Vacuolar protein sorting-associated protein 26