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dyw daywake [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31252, updated on 9-Dec-2024

Summary

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Official Symbol
dywprovided by FlyBase
Official Full Name
daywakeprovided by FlyBase
Primary source
FLYBASE:FBgn0000092
Locus tag
Dmel_CG2650
See related
AllianceGenome:FB:FBgn0000092
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
0.9; 0.9 gene; 0.9kb; anon-3B1.2; CG2650; Dmel\CG2650; EG:155E2.1; FBgn0000092; JHBP8
Summary
Involved in circadian rhythm and positive regulation of circadian sleep/wake cycle, wakefulness. Predicted to be active in extracellular space. Is expressed in epidermis and eye. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See dyw in Genome Data Viewer
Location:
3B2-3B2; 1-1.5 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (2692732..2693886, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (2586765..2587919, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Helix loop helix protein 3B Neighboring gene long non-coding RNA:CR44470 Neighboring gene uncharacterized protein Neighboring gene period Neighboring gene Paraplegin Neighboring gene L(3)mbt interactor in ovarian somatic cells

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression of a Drosophila mRNA is under circadian clock control during pupation. Lorenz LJ, et al. Development, 1989 Dec. PMID 2517256
  2. Temporal and spatial expression of an adult cuticle protein gene from Drosophila suggests that its protein product may impart some specialized cuticle function. Qiu J, et al. Dev Biol, 1995 Feb. PMID 7875368
  3. Molecular and behavioral analysis of four period mutants in Drosophila melanogaster encompassing extreme short, novel long, and unorthodox arrhythmic types. Hamblen MJ, et al. Genetics, 1998 May. PMID 9584094, Free PMC Article
  4. Molecular evolution in the Drosophila yakuba period locus. Thackeray JR, et al. J Mol Evol, 1990 Nov. PMID 1702156
  5. Did a small thermosensitive intron contribute to the temperate adaptation of Drosophila melanogaster? Edery I. Med Res Arch, 2023 Nov. PMID 38144715, Free PMC Article

See all (50) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in circadian rhythm IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in multicellular organismal reproductive process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in positive regulation of circadian sleep/wake cycle, wakefulness IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in extracellular space ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
daywake
Names
0.9kb transcript
CG2650-PA
anonymous 0.9 kb RNA
dyw-PA
juvenile hormone binding protein 8

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    2692732..2693886 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130660.2 → NP_570016.1  daywake [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_570016.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O76879, Q24484, Q8MM43, Q8MM44, Q8SY82, Q9W4W9
    Related
    FBpp0070480
    Conserved Domains (1) summary
    smart00700
    Location:29 → 258
    JHBP; Juvenile hormone binding protein domains in insects
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O76879.2 O76879

Gene LinkOut

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