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Zfp691 zinc finger protein 691 [ Rattus norvegicus (Norway rat) ]

Gene ID: 313548, updated on 27-Nov-2024

Summary

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Official Symbol
Zfp691provided by RGD
Official Full Name
zinc finger protein 691provided by RGD
Primary source
RGD:1308150
See related
EnsemblRapid:ENSRNOG00000007398 AllianceGenome:RGD:1308150
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Znf691; RGD1308150
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Orthologous to human ZNF691 (zinc finger protein 691). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Adrenal (RPKM 45.0), Muscle (RPKM 36.3) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Zfp691 in Genome Data Viewer
Location:
5q36
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (138065576..138070269, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (132780259..132784954, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (138217841..138222534, complement)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108351021 Neighboring gene solute carrier family 2 member 1 Neighboring gene uncharacterized LOC120102964 Neighboring gene erythroblast membrane associated protein (Scianna blood group) Neighboring gene small vasohibin binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
zinc finger protein 691

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001107968.2 → NP_001101438.1  zinc finger protein 691

    See identical proteins and their annotated locations for NP_001101438.1

    Status: PROVISIONAL

    Source sequence(s)
    BC166565
    UniProtKB/TrEMBL
    B2GV80, F7FAI2
    Related
    ENSRNOP00000103975.1, ENSRNOT00000149531.1
    Conserved Domains (4) summary
    COG5048
    Location:73 → 234
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:197 → 217
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:251 → 273
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:97 → 122
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    138065576..138070269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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