U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PPL_09388 peptidase M8 [ Polysphondylium pallidum PN500 ]

Gene ID: 31364863, updated on 16-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
PPL_09388
Gene description
peptidase M8
Locus tag
PPL_09388
Gene type
protein coding
RNA name
peptidase M8
RefSeq status
PROVISIONAL
Organism
Polysphondylium pallidum PN500 (strain: PN500)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PPL_09388 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_008805071.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_008805071.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Phylogeny-wide analysis of social amoeba genomes highlights ancient origins for complex intercellular communication. Heidel AJ, et al. Genome Res, 2011 Nov. PMID 21757610, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
peptidase M8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_008805071.1 Reference assembly

    Range
    2215448..2219944
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020580183.1 → XP_020430016.1  peptidase M8 [Polysphondylium pallidum PN500]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D3BLF4
    Conserved Domains (2) summary
    cl19482
    Location:267 → 704
    Peptidase_M8; Leishmanolysin
    pfam13236
    Location:1 → 55
    CLU; Clustered mitochondria
Nucleotide Protein
Heading Accession and Version