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CG5921 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31538, updated on 4-Jan-2025

Summary

Official Symbol
CG5921provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0029835
Locus tag
Dmel_CG5921
See related
AllianceGenome:FB:FBgn0029835
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG5921
Summary
Predicted to enable spectrin binding activity. Predicted to be involved in G2/M transition of mitotic cell cycle. Predicted to be located in apical part of cell. Predicted to be part of stereocilia ankle link complex. Predicted to be active in cilium; plasma membrane; and stereocilium tip. Human ortholog(s) of this gene implicated in Usher syndrome; Usher syndrome type 1; Usher syndrome type 1C; and autosomal recessive nonsyndromic deafness 18A. Orthologous to human USH1C (USH1 protein network component harmonin). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See CG5921 in Genome Data Viewer
Location:
5D3-5D3; 1-15 cM
Exon count:
8
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6050828..6065646)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (5944861..5959679)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Malignant T cell amplified sequence 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Tetraspanin 5D

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables spectrin binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in G2/M transition of mitotic cell cycle ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in apical part of cell ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in cilium IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of stereocilia ankle link complex IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in stereocilium tip IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
uncharacterized protein
Names
CG5921-PC
CG5921-PD
CG5921-PE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    6050828..6065646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_132062.3NP_572290.2  uncharacterized protein Dmel_CG5921, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572290.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IRR2
    Conserved Domains (1) summary
    cd00992
    Location:82152
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
  2. NM_167058.3NP_727061.2  uncharacterized protein Dmel_CG5921, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727061.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W443
    Conserved Domains (1) summary
    cd00992
    Location:82152
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
  3. NM_001272336.1NP_001259265.1  uncharacterized protein Dmel_CG5921, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259265.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PJ67
    Conserved Domains (1) summary
    cd00992
    Location:82152
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...