U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Ogfrl1 opioid growth factor receptor-like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 316290, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
Ogfrl1provided by RGD
Official Full Name
opioid growth factor receptor-like 1provided by RGD
Primary source
RGD:1308498
See related
EnsemblRapid:ENSRNOG00000014142 AllianceGenome:RGD:1308498
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable opioid growth factor receptor activity. Predicted to be located in membrane. Orthologous to human OGFRL1 (opioid growth factor receptor like 1). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Lung (RPKM 258.5), Brain (RPKM 194.7) and 8 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Ogfrl1 in Genome Data Viewer
Location:
9q13
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (33320501..33338742, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (25828865..25842424, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (29634178..29647903, complement)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480562 Neighboring gene ring-box 1, pseudogene 1 Neighboring gene microRNA 30c-2 Neighboring gene ribosomal protein L10A, pseudogene 8 Neighboring gene uncharacterized LOC120094843 Neighboring gene 60S ribosomal protein L23a pseudogene Neighboring gene 60S ribosomal protein L29-like Neighboring gene beta-1,3-glucuronyltransferase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Clone Names

  • MGC116379

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables opioid growth factor receptor activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
opioid growth factor receptor-like protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025708.1 → NP_001020879.1  opioid growth factor receptor-like protein 1

    See identical proteins and their annotated locations for NP_001020879.1

    Status: PROVISIONAL

    Source sequence(s)
    BC099205
    UniProtKB/Swiss-Prot
    Q4KLH3
    Conserved Domains (2) summary
    pfam05887
    Location:6 → 93
    Trypan_PARP; Procyclic acidic repetitive protein (PARP)
    pfam04664
    Location:114 → 320
    OGFr_N; Opioid growth factor receptor (OGFr) conserved region

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    33320501..33338742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039083549.2 → XP_038939477.1  opioid growth factor receptor-like protein 1 isoform X1

    UniProtKB/TrEMBL
    F1M9G3
    Related
    ENSRNOP00000019062.6, ENSRNOT00000019062.8
    Conserved Domains (1) summary
    pfam04664
    Location:115 → 321
    OGFr_N; Opioid growth factor receptor (OGFr) conserved region
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4KLH3.1 GenPept UniProtKB/Swiss-Prot:Q4KLH3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools