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Hmgb4l7 high-mobility group box 4 like 7 [ Rattus norvegicus (Norway rat) ]

Gene ID: 317604, updated on 9-Dec-2024

Summary

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Official Symbol
Hmgb4l7provided by RGD
Official Full Name
high-mobility group box 4 like 7provided by RGD
Primary source
RGD:1566008
See related
EnsemblRapid:ENSRNOG00000073930 AllianceGenome:RGD:1566008
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1566008
Summary
Predicted to enable DNA binding activity. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See Hmgb4l7 in Genome Data Viewer
Location:
Xq36
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (140658098..140658812, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (135622322..135623034, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (140379673..140380410, complement)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 101 Neighboring gene uncharacterized LOC134484179 Neighboring gene U1 small nuclear ribonucleoprotein C-like Neighboring gene ribosomal protein L18, pseudogene 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
high mobility group protein B4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    140658098..140658812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006257584.5 → XP_006257646.1  high mobility group protein B4-like

    See identical proteins and their annotated locations for XP_006257646.1

    UniProtKB/TrEMBL
    A0A8I6A6Y4, A0A8I6AIS0
    Related
    ENSRNOP00000102193.1, ENSRNOT00000141670.1
    Conserved Domains (1) summary
    cd01390
    Location:95 → 158
    HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
Nucleotide Protein Strain
Heading Accession and Version

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