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CG43902 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31948, updated on 4-Jan-2025

Summary

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Official Symbol
CG43902provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0264503
Locus tag
Dmel_CG43902
See related
AllianceGenome:FB:FBgn0264503
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG12644; CG15311; Dmel\CG43902
Old locus tag
Dmel_CG12644; Dmel_CG15311
Summary
Predicted to enable RNA binding activity; chromatin binding activity; and histone binding activity. Predicted to be involved in chromatin remodeling. Predicted to be active in cytoplasm; nucleolus; and nucleoplasm. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG43902 in Genome Data Viewer
Location:
9B2-9B3; 1-31 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10158434..10195337)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (10052467..10089370)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene RhoU Neighboring gene antisense RNA:CR44894 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR32690 Neighboring gene long non-coding RNA:CR43899 Neighboring gene Yippee-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mysterious inhibitory cell regulator investigated and found likely to be secretogranin II related. Hart JE, et al. PeerJ, 2017. PMID 29043108, Free PMC Article
  2. Unpredictable Effects of the Genetic Background of Transgenic Lines in Physiological Quantitative Traits. Evangelou A, et al. G3 (Bethesda), 2019 Nov 5. PMID 31540975, Free PMC Article
  3. RNA-seq analysis of Drosophila clock and non-clock neurons reveals neuron-specific cycling and novel candidate neuropeptides. Abruzzi KC, et al. PLoS Genet, 2017 Feb. PMID 28182648, Free PMC Article
  4. Single cell transcriptome atlas of the Drosophila larval brain. Brunet Avalos C, et al. Elife, 2019 Nov 20. PMID 31746739, Free PMC Article
  5. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables histone binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in chromatin remodeling IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG43902-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    10158434..10195337
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_132380.2 → NP_572608.2  uncharacterized protein Dmel_CG43902 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572608.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W2X8
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W2X8 Q9W2X8

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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