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Dusp4 dual specificity phosphatase 4 [ Mus musculus (house mouse) ]

Gene ID: 319520, updated on 27-Nov-2024

Summary

Official Symbol
Dusp4provided by MGI
Official Full Name
dual specificity phosphatase 4provided by MGI
Primary source
MGI:MGI:2442191
See related
Ensembl:ENSMUSG00000031530 AllianceGenome:MGI:2442191
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MKP2; 2700078F24Rik; E130306H24Rik
Summary
Predicted to enable phosphoprotein phosphatase activity. Predicted to be involved in several processes, including dephosphorylation; endoderm formation; and negative regulation of ERK1 and ERK2 cascade. Predicted to be located in nucleoplasm. Predicted to be active in cytoplasm and nucleus. Is expressed in nervous system; olfactory epithelium; and unsegmented mesenchyme. Orthologous to human DUSP4 (dual specificity phosphatase 4). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in whole brain E14.5 (RPKM 27.6), CNS E14 (RPKM 24.4) and 20 other tissues See more
Orthologs
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Genomic context

See Dusp4 in Genome Data Viewer
Location:
8 A4; 8 21.16 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (35274448..35289106)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (34807610..34819894)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA B930018H19 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:35676284-35676393 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:35676481-35676682 Neighboring gene STARR-positive B cell enhancer ABC_E9724 Neighboring gene STARR-seq mESC enhancer starr_21166 Neighboring gene predicted gene, 34096 Neighboring gene STARR-seq mESC enhancer starr_21167 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:35734728-35735001 Neighboring gene predicted gene, 46069 Neighboring gene STARR-seq mESC enhancer starr_21171 Neighboring gene STARR-positive B cell enhancer ABC_E8233 Neighboring gene STARR-positive B cell enhancer ABC_E6632 Neighboring gene STARR-positive B cell enhancer ABC_E6633 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:35867988-35868175 Neighboring gene STARR-positive B cell enhancer ABC_E1363 Neighboring gene tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:36008219-36008402 Neighboring gene STARR-positive B cell enhancer ABC_E558 Neighboring gene predicted gene, 34368

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Gene trapped (1) 
  • Targeted (5)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables MAP kinase serine/threonine phosphatase activity ISO
Inferred from Sequence Orthology
more info
 
enables MAP kinase serine/threonine phosphatase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables MAP kinase tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables MAP kinase tyrosine/serine/threonine phosphatase activity ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables calmodulin-dependent protein phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables histone H2AXS140 phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables histone H2AXY142 phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables myosin phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables non-membrane spanning protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables phosphatase activity ISO
Inferred from Sequence Orthology
more info
 
enables phosphatase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables phosphoprotein phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein tyrosine phosphatase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein tyrosine phosphatase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein tyrosine phosphatase activity, metal-dependent IEA
Inferred from Electronic Annotation
more info
 
enables protein tyrosine/threonine phosphatase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein tyrosine/threonine phosphatase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 
involved_in dephosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in dephosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in endoderm formation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of ERK1 and ERK2 cascade ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of ERK1 and ERK2 cascade ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of MAPK cascade IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
involved_in signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
dual specificity protein phosphatase 4
NP_001398513.1
NP_795907.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001411584.1NP_001398513.1  dual specificity protein phosphatase 4 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC122458
  2. NM_176933.5NP_795907.1  dual specificity protein phosphatase 4 isoform 1

    See identical proteins and their annotated locations for NP_795907.1

    Status: VALIDATED

    Source sequence(s)
    AC122458
    Consensus CDS
    CCDS22241.1
    UniProtKB/Swiss-Prot
    Q8BFV3
    UniProtKB/TrEMBL
    Q0VF80
    Related
    ENSMUSP00000033930.5, ENSMUST00000033930.5
    Conserved Domains (2) summary
    cd00127
    Location:199335
    DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
    cd01446
    Location:9162
    DSP_MapKP; N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase. This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    35274448..35289106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)