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A630076J17Rik RIKEN cDNA A630076J17 gene [ Mus musculus (house mouse) ]

Gene ID: 319929, updated on 27-Nov-2024

Summary

Official Symbol
A630076J17Rikprovided by MGI
Official Full Name
RIKEN cDNA A630076J17 geneprovided by MGI
Primary source
MGI:MGI:2442999
See related
AllianceGenome:MGI:2442999
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in liver E18 (RPKM 7.6), kidney adult (RPKM 4.6) and 5 other tissues See more
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Genomic context

See A630076J17Rik in Genome Data Viewer
Location:
3 F2.3; 3 46.72 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (107137930..107141347)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (107230614..107234031)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel, shaker-related subfamily, member 10 Neighboring gene STARR-seq mESC enhancer starr_08660 Neighboring gene chymosin Neighboring gene STARR-positive B cell enhancer ABC_E6103 Neighboring gene prokineticin 1 Neighboring gene STARR-positive B cell enhancer mm9_chr3:107081789-107082089 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 Neighboring gene solute carrier family 16 (monocarboxylic acid transporters), member 4 Neighboring gene RNA binding motif protein 15

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC319929

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001256174.1NP_001243103.1  uncharacterized protein LOC319929

    See identical proteins and their annotated locations for NP_001243103.1

    Status: VALIDATED

    Source sequence(s)
    AA119196, AI452133, AK080367
    Consensus CDS
    CCDS57252.1
    UniProtKB/TrEMBL
    J3QQ32

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    107137930..107141347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)