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pfdn2 prefoldin subunit 2 [ Danio rerio (zebrafish) ]

Gene ID: 323012, updated on 4-Jan-2025

Summary

Official Symbol
pfdn2provided by ZNC
Official Full Name
prefoldin subunit 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-060519-27
See related
Ensembl:ENSDARG00000025391 AllianceGenome:ZFIN:ZDB-GENE-060519-27
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
im:6895552; wu:fb79a01; zgc:136473
Summary
Predicted to enable protein folding chaperone. Predicted to be involved in protein folding. Predicted to be part of prefoldin complex. Predicted to be active in cytoplasm. Orthologous to human PFDN2 (prefoldin subunit 2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See pfdn2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (7477398..7493741, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (7244029..7260372, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene beta-1,4-glucuronyltransferase 1 Neighboring gene nitrilase 1 Neighboring gene chloride channel 3 Neighboring gene uncharacterized LOC100536361 Neighboring gene uncharacterized LOC101882062

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables protein folding chaperone IBA
Inferred from Biological aspect of Ancestor
more info
 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in protein folding IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within protein folding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of prefoldin complex IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001045289.1NP_001038754.1  prefoldin subunit 2

    See identical proteins and their annotated locations for NP_001038754.1

    Status: PROVISIONAL

    Source sequence(s)
    BC116551
    UniProtKB/TrEMBL
    A0A8M1NAE4, Q1JPY6
    Related
    ENSDARP00000035261.6, ENSDART00000036703.7
    Conserved Domains (1) summary
    pfam01920
    Location:23125
    Prefoldin_2; Prefoldin subunit

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    7477398..7493741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394672.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    28170..44513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)