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CG12540 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32393, updated on 18-Sep-2024

Summary

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Official Symbol
CG12540provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0030570
Locus tag
Dmel_CG12540
See related
AllianceGenome:FB:FBgn0030570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RE49992; Dmel\CG12540
Orthologs
all
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Genomic context

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See CG12540 in Genome Data Viewer
Location:
12E11-12E11; 1-48 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (14496135..14497240)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (14390168..14391273)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene defective proboscis extension response 8 Neighboring gene Nascent-associated complex beta-subunit-like, testis 4 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44110 Neighboring gene long non-coding RNA:CR45521

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide prediction of Polycomb/Trithorax response elements in Drosophila melanogaster. Ringrose L, et al. Dev Cell, 2003 Nov. PMID 14602076
  2. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  3. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
  4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
  5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG12540-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    14496135..14497240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_132735.3 → NP_572963.1  uncharacterized protein Dmel_CG12540 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572963.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VY30
    Related
    FBpp0073746
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VY30 Q9VY30

Gene LinkOut

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