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CNN00970 RAB-protein geranylgeranyltransferase, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3255387, updated on 17-May-2024

Summary

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Gene symbol
CNN00970
Gene description
RAB-protein geranylgeranyltransferase, putative
Locus tag
CNN00970
See related
FungiDB:CNN00970; VEuPathDB:CNN00970
Gene type
protein coding
RNA name
RAB-protein geranylgeranyltransferase, putative
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNN00970 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
8
Sequence:
Chromosome: 14; NC_006683.1 (304143..306109)

Chromosome 14 - NC_006683.1Genomic Context describing neighboring genes Neighboring gene endoplasmic reticulum protein, putative Neighboring gene protein kinase, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hydrolase, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006683.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Rab geranylgeranyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein geranylgeranylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Rab-protein geranylgeranyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RAB-protein geranylgeranyltransferase, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006683.1 Reference assembly

    Range
    304143..306109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_568534.2 → XP_568534.1  RAB-protein geranylgeranyltransferase, putative [Cryptococcus neoformans var. neoformans JEC21]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A225XDS3, Q55HM4, Q5K762
    Conserved Domains (2) summary
    COG5536
    Location:1 → 325
    BET4; Protein prenyltransferase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
    pfam01239
    Location:138 → 164
    PPTA; Protein prenyltransferase alpha subunit repeat
Nucleotide Protein
Heading Accession and Version

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