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CG31016 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 326113, updated on 9-Dec-2024

Summary

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Official Symbol
CG31016provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0051016
Locus tag
Dmel_CG31016
See related
AllianceGenome:FB:FBgn0051016
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9708; Dmel\CG31016
Summary
Predicted to enable procollagen-proline 4-dioxygenase activity. Involved in sexual reproduction. Predicted to be active in endoplasmic reticulum. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG31016 in Genome Data Viewer
Location:
100A1-100A1; 3-101 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (30606189..30610456)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (26431911..26436178)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene prolyl-4-hydroxylase-alpha NE3 Neighboring gene long non-coding RNA:CR45571 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Testing Implications of the Omnigenic Model for the Genetic Analysis of Loci Identified through Genome-wide Association. Zhang W, et al. Curr Biol, 2021 Mar 8. PMID 33417882
  2. Seminal influences: Drosophila Acps and the molecular interplay between males and females during reproduction. Ravi Ram K, et al. Integr Comp Biol, 2007 Sep. PMID 21672851
  3. Transcriptome analysis provides insights for understanding the adverse effects of endosulfan in Drosophila melanogaster. Sharma A, et al. Chemosphere, 2011 Jan. PMID 21036383
  4. The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. Jehrke L, et al. Sci Rep, 2018 Apr 18. PMID 29670218, Free PMC Article
  5. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
  
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
  
enables procollagen-proline 4-dioxygenase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables procollagen-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in sexual reproduction IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG31016-PB
CG31016-PC
NP_001263119.1
NP_733393.3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    30606189..30610456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_170514.3 → NP_733393.3  uncharacterized protein Dmel_CG31016, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_733393.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8WHF9, Q9VA52
    Conserved Domains (2) summary
    smart00702
    Location:333 → 508
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:31 → 160
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

  2. NM_001276190.1 → NP_001263119.1  uncharacterized protein Dmel_CG31016, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001263119.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8WHF9, Q9VA52
    Conserved Domains (2) summary
    smart00702
    Location:333 → 508
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:31 → 160
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VA52 Q9VA52

Gene LinkOut

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