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Ubi-p5E Ubiquitin-5E [ Drosophila melanogaster (fruit fly) ]

Gene ID: 326237, updated on 9-Dec-2024

Summary

Official Symbol
Ubi-p5Eprovided by FlyBase
Official Full Name
Ubiquitin-5Eprovided by FlyBase
Primary source
FLYBASE:FBgn0086558
Locus tag
Dmel_CG32744
See related
AllianceGenome:FB:FBgn0086558
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG18282; CG32744; CR32744; Dmel\CG32744; DmUb; DmUbi-p5E; Ub; UB; Ubi; Ubiq
Old locus tag
CG32744
Summary
Predicted to enable protein tag activity and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in protein ubiquitination and ubiquitin-dependent protein catabolic process. Located in polytene chromosome band. Is expressed in organism and testis. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See Ubi-p5E in Genome Data Viewer
Location:
5E4-5E4; 1-16 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6276876..6279647, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6170909..6173680, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene schlank Neighboring gene Josephin domain containing Neighboring gene Spt6 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45530 Neighboring gene pseudo

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables protein tag activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein tag activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ubiquitin protein ligase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in modification-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein modification process ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in protein ubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein ubiquitination ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in ubiquitin-dependent protein catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in polytene chromosome band IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Ubiquitin-5E
Names
CG32744-PA
CG32744-PB
Ubi-p5E-PA
Ubi-p5E-PB
ubiquitin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    6276876..6279647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298008.1NP_001284937.1  Ubiquitin-5E, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001284937.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W418
    Conserved Domains (1) summary
    cd01803
    Location:77152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
  2. NM_167065.3NP_727078.1  Ubiquitin-5E, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727078.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W418
    Related
    FBpp0070894
    Conserved Domains (1) summary
    cd01803
    Location:77152
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin