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CG34325 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32656, updated on 9-Dec-2024

Summary

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Official Symbol
CG34325provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0085354
Locus tag
Dmel_CG34325
See related
AllianceGenome:FB:FBgn0085354
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG18358; Dmel\CG34325
Summary
Orthologous to human FHL2 (four and a half LIM domains 2) and FHL5 (four and a half LIM domains 5). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG34325 in Genome Data Viewer
Location:
15A3-15A3; 1-55 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (16714449..16721411, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (16608482..16615444, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene gone early Neighboring gene TweedleX Neighboring gene TweedleY

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Roles of the LIM Domain Proteins in Drosophila Cardiac and Hematopoietic Morphogenesis. She M, et al. Front Cardiovasc Med, 2021. PMID 33681304, Free PMC Article
  2. Variant functional assessment in Drosophila by overexpression: what can we learn? Her Y, et al. Genome, 2024 Jun 1. PMID 38412472
  3. Genome-Wide Association Study of Circadian Behavior in Drosophila melanogaster. Harbison ST, et al. Behav Genet, 2019 Jan. PMID 30341464, Free PMC Article
  4. A single-cell atlas and lineage analysis of the adult Drosophila ovary. Rust K, et al. Nat Commun, 2020 Nov 6. PMID 33159074, Free PMC Article
  5. Nociceptor-Enriched Genes Required for Normal Thermal Nociception. Honjo K, et al. Cell Rep, 2016 Jul 12. PMID 27346357, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables transcription coregulator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in Z disc IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG34325-PA
CG34325-PB
CG34325-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    16714449..16721411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298419.1 → NP_001285348.1  uncharacterized protein Dmel_CG34325, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285348.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    X2JFG6
    Conserved Domains (1) summary
    cl02475
    Location:52 → 100
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  2. NM_001103533.2 → NP_001097003.1  uncharacterized protein Dmel_CG34325, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097003.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VXC1
    Conserved Domains (1) summary
    cl02475
    Location:67 → 119
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  3. NM_001298418.1 → NP_001285347.1  uncharacterized protein Dmel_CG34325, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285347.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VXC1
    Conserved Domains (1) summary
    cl02475
    Location:67 → 119
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VXC1 Q9VXC1
X2JFG6 X2JFG6

Gene LinkOut

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