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ier5l immediate early response 5-like [ Danio rerio (zebrafish) ]

Gene ID: 326935, updated on 4-Jan-2025

Summary

Official Symbol
ier5lprovided by ZNC
Official Full Name
immediate early response 5-likeprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5134
See related
Ensembl:ENSDARG00000054906 AllianceGenome:ZFIN:ZDB-GENE-030131-5134
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fe50b07; zgc:73321; zgc:77455; wu:fe50b07
Summary
Is expressed in several structures, including midbrain neural keel; myotome; pectoral fin; periderm; and retina. Orthologous to human IER5L (immediate early response 5 like). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See ier5l in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (32791245..32793481)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (32191092..32193328)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene NADPH dependent diflavin oxidoreductase 1 Neighboring gene N-terminal Xaa-Pro-Lys N-methyltransferase 1 Neighboring gene protein phosphatase 2 phosphatase activator Neighboring gene carnitine O-acetyltransferase a

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
immediate early response gene 5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199754.1NP_956048.1  immediate early response gene 5-like protein

    See identical proteins and their annotated locations for NP_956048.1

    Status: PROVISIONAL

    Source sequence(s)
    BC059641
    UniProtKB/Swiss-Prot
    Q6NYT3, Q6PBN7
    UniProtKB/TrEMBL
    A0A0R4I9D9
    Related
    ENSDARP00000071657.3, ENSDART00000077189.5
    Conserved Domains (1) summary
    pfam05760
    Location:5305
    IER; Immediate early response protein (IER)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    32791245..32793481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394586.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    292979..295215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395240.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    53268..55504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)